Itchy Skin Above Eyebrows. Sounds like you might possibly have seborrheic dermatitis. The cyst can also form when the sebaceous glans on eyebrow become blocked.
A person may have whitish, gray, or yellow flakes of skin under and around their eyebrows. The area may be flushed or inflamed, and a person may feel the need to itch or pick the area. Now, rub it around your eyes for some time.